cutadapt -h 
cd data 
foreach i ( *fastq ) 
echo "(cutadapt -a ATCTCGTATGCCGTCTTCTGCTTG -m 16 -M 28 -o 2_cutadapt/$i.cut.fq data/$i) >& 2_cutadapt/$i.cut.log" >> ../2_cutadapt.jobs 
end
cd .. 
qarray -q test.q -o 2_cutadapt -e 2_cutadapt -N cadapt 2_cutadapt.jobs